TrimGalore is a wrapper tool that automates quality and adapter trimming to FastQ files. It also provides functionality to RRBS sequence files.
Availability and Restrictions
Versions
TrimGalore is available on the Owens cluster. The versions currently available at OSC are:
| Version | Owens |
|---|---|
| 0.4.5 | X* |
* Current default version
You can use module spider trimgalore to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
Access
TrimGalore is available to all OSC users. If you have any questions, please contact OSC Help.
Publisher/Vendor/Repository and License Type
The Babraham Institute, Open source
Usage
Usage on Owens
Set-up
To configure your enviorment for use of TrimGalore, use command module load trimgalore. This will load the default version.
Further Reading
Supercomputer:
Fields of Science:
