SPM is made freely available to the [neuro]imaging community, to promote collaboration and a common analysis scheme across laboratories. The software represents the implementation of the theoretical concepts of Statistical Parametric Mapping in a complete analysis package.
The SPM software is a suite of MATLAB (MathWorks) functions and subroutines with some externally compiled C routines. SPM was written to organise and interpret our functional neuroimaging data. The distributed version is the same as that we use ourselves.
Availability and Restrictions
Versions
The following versions are available on OSC clusters:
|
VERSION |
Pitzer |
|---|---|
| 8 |
X |
| 12.7771 | X* |
* Current default version
spm/12.7771 comes with CONN 0.19 and xjview 9.7
spm/8 comes with CONN 0.19, xjview 9.7, and Marsbar 0.44
You can use module spider spm to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
Access
SPM is available to all OSC users. If you have any questions, please contact OSC Help.
Publisher/Vendor/Repository and License Type
SPM is free but copyright software, distributed under the terms of the GNU General Public Licence as published by the Free Software Foundation (either version 2, as given in file LICENCE.txt, or at your option, any later version). Further details on "copyleft" can be found at https://www.gnu.org/copyleft/. In particular, SPM is supplied as is. No formal support or maintenance is provided or implied.
Usage
Usage on Pitzer
Set-up
To configure your environment for use of SPM, run the following command: module load spm. The default version will be loaded. To select a particular AFNI version, use module load spm/version. For example, use module load spm/12.7771 to load SPM/12.7771.
SPM is a MATLAB suite, so you need to load MATLAB before you can use SPM:
module load matlab/r2020a module load spm/12.7771 or module load matlab/r2020a module load spm/8
Note that spm/12.7771 comes with CONN 0.19 and xjview 9.7, and spm/8 comes with CONN 0.19, xjview 9.7, and Marsbar 0.44. Marsbar 0.44 doesn't support spm/12.7771.
