STAR: Spliced Transcripts Alignment to a Reference.
Availability and Restrictions
Versions
The following versions of STAR are available on OSC clusters:
| Version | Owens | Pitzer | Cardinal |
|---|---|---|---|
| 2.5.2a | X* | X* | |
| 2.6.0a | X | ||
| 2.7.9a | X | X | |
| 2.7.10b | X |
* Current default version
You can use module spider star to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
Access
STAR is available to all OSC users. If you have any questions, please contact OSC Help.
Publisher/Vendor/Repository and License Type
Alexander Dobin, Open source
Usage
Usage on Owens
Set-up
To configure your environment for use of STAR, run the following command:
module load star. The default version will be loaded. To select a particular STAR version, use module load star/version. For example, use module load star/2.5.2a to load STAR 2.5.2a.Further Reading
Service:
Fields of Science:
