MUSCLE is a program for creating multiple alignments of protein sequences.
Availability and Restrictions
Versions
The following versions of bedtools are available on OSC clusters:
| Version | Owens | Pitzer |
|---|---|---|
| 3.8.31 | X* | X* |
* Current default version
You can use module spider muscle to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
Access
MUSCLE is available to all OSC users. If you have any questions, please contact OSC Help.
Publisher/Vendor/Repository and License Type
Public domain software.
Usage
Usage on Owens
Set-up
To configure your environment for use of metilene, run the following command:
module load muscle. The default version will be loaded. To select a particular MUSCLE version, use module load muscle/version. For example, use module load muscle/3.8.31 to load MUSCLE 3.8.31.Usage on Pitzer
Set-up
To configure your environment for use of metilene, run the following command:
module load muscle. The default version will be loaded. To select a particular MUSCLE version, use module load muscle/version. For example, use module load muscle/3.8.31 to load MUSCLE 3.8.31.Further Reading
Service:
Fields of Science:
