MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.
Availability and Restrictions
Versions
The following versions of MIRA are available on OSC clusters:
| Version | Owens |
|---|---|
| 4.0.2 | X* |
* Current default version
You can use module spider mira to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
Access
MIRA is available to all OSC users. If you have any questions, please contact OSC Help.
Publisher/Vendor/Repository and License Type
Bastien Chevreux, Open source
Usage
Usage on Owens
Set-up
To configure your environment for use of MIRA, run the following command:
module load mira. The default version will be loaded. To select a particular MIRA version, use module load mira/version. For example, use module load mira/4.0.2 to load MIRA 4.0.2.Further Reading
Supercomputer:
Service:
Fields of Science:
