Search Documentation

HOWTO: Add InCommon Authentication to Globus

(OPTIONAL) Adding InCommon Authentication 

Adding InCommon authentication to your Globus account allows you to login to Globus Online using your university credentials.  Using this process you can store your Globus username password for safe keeping, and instead use your university username and password to login.  If your already logged in to your university authentication system, logging in to Globus can be as simple as two clicks away.

Classroom Project Resource Guide

Welcome to OSC! This document includes some useful information to help your classroom use of our resources be effective.

Access: We suggest that students consider connecting to https://ondemand.osc.edu/ to access the HPC resources. All production supercomputing resources can be accessed via that website, without having to worry about client configuration.

New User Resource Guide

Welcome to OSC! This document provides some useful links to get you started.

If you are new to supercomputing, or to OSC, please visit http://www.osc.edu/supercomputing/getting-started for information about how our supercomputers are configured, and some guidance about appropriate usage of the various resources.

HOWTO: Transfer files using Globus Connect

Globus Connect Logo

Globus Connect is a reliable, high-performance file transfer platform allowing users to transfer large amounts of data seamlessly between systems.  It aims to make transfers a "click-and-forget" process by setting up configuration details in the background and automating fault recovery.  

Globus can be used for both file transfers between OSC and:

Queues and Reservations

Here are the queues available on Glenn. Please note that you will be routed to the appropriate queue based on your walltime and job size request.

Name Nodes available max walltime max job size notes

Serial

Available minus reservations

168 hours

1 node

 

Statewide Users Group Minutes, November 8, 2013

Statewide Users Group Minutes, November 8, 2013

 

Attending: Mike Drapcho, Jim Giuliani, Christopher Hadad, John Heimaster, Dan Lacks, Robert Marcus, Rich Markham, Russ Pitzer, Rick Prairie, Keith Stewart

 

Agenda:

Statewide Users Group Agenda
November 8, 2013  

10:00 a.m.: Coffee and Tea (BALE Conference)

10:15 a.m.: Committee Meetings

Statewide Users Group Agenda, November 8, 2013--TENTATIVE

Statewide Users Group Agenda
November 8, 2013    *TENTATIVE**

10:00 a.m.: Coffee and Tea (BALE Conference)

10:15 a.m.: Committee Meetings

    Hardware and Operations (BALE Conference)
   *****Allocations--will take place on Thursday, December 12*****
    Software and Activities (Stutz/Buckeye Conference)

11:45 a.m.: Lunch (BALE Conference)

12:30 p.m.: Welcome--John Herbert, Vice-chair

Queues and Reservations

Here are the queues available on Oakley. Please note that you will be routed to the appropriate queue based on your walltime and job size request.

Name Nodes available max walltime max job size notes

Serial

Available minus reservations

168 hours

1 node

 

HOWTO: Configure the MATLAB Parallel Computing Toolbox

Introduction

In some cases, it may be necessary for you to use the MATLAB Parallel Computing Toolbox to remotely connect to OSC resources, whether to run parallel jobs in MATLAB or to use toolboxes for which you own your own licenses.  This guide will explain the basics for how to configure your MATLAB installation in order to connect remotely to Oakley using MATLAB 2013a.

Cambridge Structural Database

Introduction

The Cambridge Structural Database (CSD) contains complete structure information on hundreds of thousands of small molecule crystals. The Cambridge Crystallographic Data Centre (CCDC) is a suite of programs for CSD search and analysis. The Cambridge Crystallographic Data Centre Home Page has additional information.

Version

Several versions are available at OSC. Search for csd in this list:

module avail

Pages