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Negative Balance Policy Updates

Updated negative balance policy to be implemented on October 1. Public comment period through August 31. Please see https://www.osc.edu/resources/technical_support/supercomputing-policies/proposed_osc_policies_for_public_comments.

Bismark 0.22.1 is available on Pitzer and Owens

Date:

Monday, July 29, 2019 - 11:00am

System(s):

Owens

Pitzer

Bismark is installed on Pitzer and Owens.

module load bismark/0.22.1

Clustal W

Clustal W is a multiple sequence alignment program written in C++.

Availability and Restrictions

Versions

The following versions of bedtools are available on OSC clusters:

MUSCLE 3.8.31 is available on Pitzer and Owens

Date:

Thursday, July 25, 2019 - 11:00am

System(s):

Owens

Pitzer

MUSCLE 3.8.31 is installed on Pitzer and Owens.

module load muscle/3.8.31

MUSCLE

MUSCLE is a program for creating multiple alignments of protein sequences.

Availability and Restrictions

Versions

The following versions of bedtools are available on OSC clusters:

BWA Software Vulnerability

Due to a recent software vulnerability discovered in bwa versions 0.7.17 and 0.7.13, it is highly recommended that you immediately stop using these versions and instead use bwa/0.7.17-r1198 which contains a patch to mitigate this vulnerability. Details on the vulnerability can be found in the following webpages: https://nvd.nist.gov/vuln/detail/CVE-2019-10269#vulnCurrentDescriptionTitle https://coreymhudson.github.io/bwa_vulnerabilties/ Please contact OSC Help if you have any questions or concerns. Toll Free: (800) 686-6472 Local: (614) 292-1800 Email: oschelp@osc.ed