Pitzer

HPC Toolkit

HPC Toolkit is a collection of tools that measure a program's work, resource consumption, and inefficiency to analze performance.

Availability and Restrictions

Versions

The following versions of HPC Toolkitare available on OSC clusters:

Java

Java is a concurrent, class-based, object-oriented programming language.

Availability and Restrictions

Versions

Java is available on all OSC clusters. Only one version is available at any given time. To find out the current version, run:

java --version

Feel free to contact OSC Help if you need other versions for your work.

Git

Git is a version control system used for tracking file changes and facilitating collaborative work.

Availability and Restrictions

Versions

Git is available on all OSC clusters. Only one version is available at any given time. To find out the current version:

git version

Access

Git is available to all OSC users. If you have any questions, please contact OSC Help.

Technical Specifications

Login Specifications
4 Intel Xeon Gold 6148 (Skylake) CPUs
  • 40 cores/node and 384 GB of memory/node

Technical specifications for 2018 Pitzer:  

Number of Nodes

260 nodes

Number of CPU Sockets

528 (2 sockets/node for standard node)

Number of CPU Cores

10,560 (40 cores/node for standard node)

Cores Per Node

40 cores/node (80 cores/node for Huge Mem Nodes)

Blender

Blender is the free and open source 3D creation suite. It supports the entirety of the 3D pipeline—modeling, rigging, animation, simulation, rendering, compositing and motion tracking, even video editing and game creation.

BLAST Database

 

OSC periodically updates The NCBI BLAST database. 

Versions

BLAST database is available on the Pitzer and Cardinal clusters. The versions currently available at OSC are:

CMake

CMake is a family of compilation tools that can be used to build, test and package software.

Availability and Restrictions

Versions

The current versions of CMake available at OSC are:

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