Pitzer
ffmpeg
FFmpeg is a free software project, the product of which is a vast software suite of libraries and programs for handling video, audio, and other multimedia files and streams.
Availability and Restrictions
Versions
The following versions of FFmpeg are available on OSC clusters:
HOWTO: Install a MATLAB toolbox
If you need to use a MATLAB toolbox that is not provided through our installations. You can follow these instructions, and if you have any difficulties you can contact OSC Help for assistance.
HPC Toolkit
HPC Toolkit is a collection of tools that measure a program's work, resource consumption, and inefficiency to analze performance.
Availability and Restrictions
Versions
The following versions of HPC Toolkitare available on OSC clusters:
Java
Java is a concurrent, class-based, object-oriented programming language.
Availability and Restrictions
Versions
Java is available on all OSC clusters. Only one version is available at any given time. To find out the current version, run:
java --version
Feel free to contact OSC Help if you need other versions for your work.
Git
Git is a version control system used for tracking file changes and facilitating collaborative work.
Availability and Restrictions
Versions
Git is available on all OSC clusters. Only one version is available at any given time. To find out the current version:
git version
Access
Git is available to all OSC users. If you have any questions, please contact OSC Help.
Technical Specifications
- Login Specifications
-
4 Intel Xeon Gold 6148 (Skylake) CPUs
- 40 cores/node and 384 GB of memory/node
Technical specifications for 2018 Pitzer:
- Number of Nodes
-
260 nodes
- Number of CPU Sockets
-
528 (2 sockets/node for standard node)
- Number of CPU Cores
-
10,560 (40 cores/node for standard node)
- Cores Per Node
-
40 cores/node (80 cores/node for Huge Mem Nodes)
Blender
Blender is the free and open source 3D creation suite. It supports the entirety of the 3D pipeline—modeling, rigging, animation, simulation, rendering, compositing and motion tracking, even video editing and game creation.
BLAST Database
OSC periodically updates The NCBI BLAST database.
Versions
BLAST database is available on the Pitzer and Cardinal clusters. The versions currently available at OSC are:
CMake
CMake is a family of compilation tools that can be used to build, test and package software.
Availability and Restrictions
Versions
The current versions of CMake available at OSC are: