This knowledge base is a collection of important, useful information about OSC systems that does not fit into a guide or tutorial, and is too long to be answered in a simple FAQ.
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Client Resources
- Getting Started
- New User Resource Guide
- HPC Basics
- Getting Connected
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- Classroom Project Resource Guide
- HOWTO
- HOW TO: Look at requested time accuracy using XDMoD
- HOWTO: Collect performance data for your program
- HOWTO: Create and Manage Python Environments
- HOWTO: Debugging Tips
- HOWTO: Establish durable SSH connections
- HOWTO: Identify users on a project account and check status
- HOWTO: Install a MATLAB toolbox
- HOWTO: Install your own Perl modules
- HOWTO: Locally Installing Software
- HOWTO: Manage Access Control List (ACLs)
- HOWTO: PyTorch Distributed Data Parallel (DDP)
- HOWTO: Reduce Disk Space Usage
- HOWTO: Run Python in Parallel
- HOWTO: Submit Homework to Repository at OSC
- HOWTO: Submit multiple jobs using parameters
- HOWTO: Tune Performance
- HOWTO: Tune VASP Memory Usage
- HOWTO: Use 'rclone' to Upload Data
- HOWTO: Use 'rclone' to Upload Data from Google Drive
- HOWTO: Use Address Sanitizer
- HOWTO: Use Cron and OSCusage for Regular Emailed Reports
- HOWTO: Use Docker and Apptainer/Singularity Containers at OSC
- HOWTO: Use Extensions with JupyterLab
- HOWTO: Use GPU in Python
- HOWTO: Use Globus (Overview)
- HOWTO: Use VNC in a batch job
- HOWTO: Use a Conda/Virtual Environment With Jupyter
- HOWTO: Use an Externally Hosted License
- HOWTO: Use ulimit command to set soft limits
- HOWTO: test data transfer speed
- Citation
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- Abaqus
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- ARM HPC tools
- AlphaFold
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- AutoDock
- BLAS
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- CIAO
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- COMSOL
- CP2K
- CUDA
- Caffe
- Cell Ranger
- Clara Parabricks
- Clustal W
- Connectome
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- Cufflinks
- DS9
- DSI Studio
- Darshan
- Desmond
- FASTX-Toolkit
- FFTW
- FSL
- FastQC
- FreeSurfer
- GAMESS
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- GNU Compilers
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- MKL - Intel Math Kernel Library
- MRIQC
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- MUSCLE
- MVAPICH2
- Mathematica
- Miniconda3
- MotionCor2
- MuTect
- NAMD
- NBO
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- NWChem
- Ncview
- NetCDF
- Neuropointillist
- Nextflow
- Nodejs
- OMB
- ORCA
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- PGI Compilers
- ParMETIS / METIS
- ParaView
- Perl
- Picard
- PnetCDF
- PyTorch
- Python
- Q-Chem
- QGIS
- Quantum Espresso
- R and Rstudio
- RELION
- RNA-SeQC
- Rosetta
- SAMtools
- SIESTA
- SRA Toolkit
- STAR
- STAR-CCM+
- STAR-Fusion
- Salmon
- ScaLAPACK
- Schrodinger
- Scipion
- SnpEff
- Spark
- Stata
- StringTie
- Subread
- Subversion
- SuiteSparse
- TAU Commander
- TensorFlow
- Texlive
- Tinker
- TopHat
- Torch
- Transmission3d
- TrimGalore
- Trimmomatic
- Trinity
- TurboVNC
- Turbomole
- USEARCH
- Unblur
- VASP
- VCFtools
- VMD
- VarScan
- VirtualGL
- VisIt
- WARP3D
- WCStools
- Wine
- XFdtd
- amdblis
- aocc
- bam2fastq
- bcftools
- bedtools
- dcm2nii
- eXpress
- fMRIPrep
- ffmpeg
- metilene
- miRDeep2
- nccl
- nvhpc
- oneAPI
- parallel-command-processor
- xcpEngine
- Software Refresh
- Statewide Software Licensing
- Storage Documentation
- Technical Support
- HPC Changelog
- Known issues
- Search Documentation
- Supercomputers
- Tutorials & Training
- Batch Processing at OSC
- Batch System Concepts
- Batch Execution Environment
- Job Scripts
- Job Submission
- Monitoring and Managing Your Job
- Scheduling Policies and Limits
- Slurm Directives Summary
- Batch Environment Variable Summary
- Batch-Related Command Summary
- License software flag usage information
- Messages from sbatch
- Troubleshooting Batch Problems
- batch email notifications
- Slurm Migration
- Knowledge Base
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- Change or Reset Password and Retrieve Usernames
- Adding grant information
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- Project review and special properties
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Recent News
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August 8:
Ohio Supercomputer Center doubles enrollment for annual youth STEM institute
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February 28:
Ohio University professor uses OSC resources to implement AI in Digital Arts + Technology courses