bcftools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF.
The following versions of bcftools are available on OSC clusters:
| Version | Owens | Pitzer |
|---|---|---|
| 1.3.1 | X* | |
| 1.9 | X* | |
| 1.16 | X | X |
You can use module spider bcftools to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
bcftools is available to all OSC users. If you have any questions, please contact OSC Help.
Genome Research Ltd., Open source
module load bcftools. The default version will be loaded. To select a particular bcftools version, use module load bcftools/version. For example, use module load bcftools/1.3.1 to load bcftools 1.3.1.module load bcftools. The default version will be loaded.